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  5. AMTR_s00053p00183230

AMTR_s00053p00183230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.130

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG0000730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000730_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00053p00183230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00181340 BG2, BGL2, PR2,... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.05 OrthoFinder output from all 47 species
Gb_08452 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Gb_35145 BG1 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
LOC_Os01g71860.1 LOC_Os01g71860 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
MA_219456g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Nbi_g41569 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34325 BG3 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09840 BG1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g060015.1.1 Solyc01g060015 Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform... 0.04 OrthoFinder output from all 47 species
Solyc02g086700.4.1 Solyc02g086700 Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Zm00001e031541_P001 Zm00001e031541 Lichenase-2 (Fragment) OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 1 292
No external refs found!