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  5. AMTR_s00055p00172380

AMTR_s00055p00172380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.89

No description available


Gene families : OG0007458 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007458_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00172380

Target Alias Description ECC score Gene Family Method Actions
Cba_g03600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G011900.1 Ceric.03G011900 not classified & original description: pacid=50573117... 0.04 OrthoFinder output from all 47 species
Ehy_g02049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030422001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g37600.1 LOC_Os02g37600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g19543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16691 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo76815 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!