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  5. AMTR_s00056p00035370

AMTR_s00056p00035370 (NCED3, SIS7, STO1,...)


Aliases : NCED3, SIS7, STO1, ATNCED3, evm_27.TU.AmTr_v1.0_scaffold00056.19

No description available


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00035370
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT1G30100 ATNCED5, NCED5 nine-cis-epoxycarotenoid dioxygenase 5 0.04 OrthoFinder output from all 47 species
Aob_g17438 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aspi01Gene19977.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54184.t1 ATCCD1, CCD1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12313 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dac_g39217 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dac_g42899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16938 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dde_g23816 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g11200 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Gb_14132 NCED3, SIS7,... Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44380.1 NCED3, SIS7,... neoxanthin cleavage protein 0.05 OrthoFinder output from all 47 species
LOC_Os07g05940.1 ATNCED9, NCED9,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
MA_10425950g0020 CCD4, NCED4 Probable carotenoid cleavage dioxygenase 4,... 0.04 OrthoFinder output from all 47 species
Mp2g07800.1 NCED3, SIS7,... carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.03 OrthoFinder output from all 47 species
Mp3g20700.1 ATNCED5, NCED5 neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Pir_g05163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15055 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Sam_g37014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012402_P001 NCED3, SIS7,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 38 140
No external refs found!