AMTR_s00056p00080350 (GATA9,...)

Aliases : GATA9, evm_27.TU.AmTr_v1.0_scaffold00056.57

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00056p00080350

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00155p00085360	GATA11,...	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
AT2G18380	GATA20	GATA transcription factor 20	0.05	OrthoFinder output from all 47 species
AT3G20750	GATA29	GATA transcription factor 29	0.02	OrthoFinder output from all 47 species
Adi_g050803	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g17183	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g32827	GATA12	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g11283	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38669	GATA2	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g48787	GATA12	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g16168	GATA5	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g09752	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g12583	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g62121	GATA12	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene30025.t1	GATA5, Aspi01Gene30025	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene69106.t1	GATA4, Aspi01Gene69106	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g02619	GATA2	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g16293	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.01G090400.1	GATA12, Ceric.01G090400	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Cre01.g025050	GATA23	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Ehy_g05496	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06602	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06867	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26522	GATA4	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26857	GATA12	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01018833001	GATA5	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01035614001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Gb_25568	GATA20	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os02g12790.1	GATA22, CGA1,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
LOC_Os12g42970.1	GATA4, LOC_Os12g42970	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Len_g05301	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g04851	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
MA_14038g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Ore_g14050	GATA19	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g26719	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g30519	GATA2	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g30520	GATA2	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g31511	GATA2	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g43293	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g17490	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g09836	GATA9	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025929	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Solyc03g033660.4.1	GATA5, Solyc03g033660	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Solyc05g056120.3.1	BME3-ZF, BME3,...	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Solyc09g091250.4.1	GATA1, Solyc09g091250	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Spa_g13016	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005940_P001	GATA4, Zm00001e005940	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e009216_P001	GATA4, Zm00001e009216	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Zm00001e026256_P001	GATA23, Zm00001e026256	transcription factor (GATA)	0.05	OrthoFinder output from all 47 species
Zm00001e037876_P002	GATA4, Zm00001e037876	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Zm00001e039468_P001	Zm00001e039468	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e039469_P001	GATA12, Zm00001e039469	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	225	259

External Links

No external refs found!

AMTR_s00056p00080350 (GATA9,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation