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  5. AMTR_s00056p00140230

AMTR_s00056p00140230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.111

Description : Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00056p00140230

Target Alias Description ECC score Gene Family Method Actions
Adi_g048053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000204.80 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Ehy_g14053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016978001 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
LOC_Os01g09430.1 LOC_Os01g09430 Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Lfl_g26674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo425605 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009439 cyanate metabolic process IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 50 326
No external refs found!