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  5. AMTR_s00056p00160320

AMTR_s00056p00160320 (PFN3, PRF3,...)


Aliases : PFN3, PRF3, evm_27.TU.AmTr_v1.0_scaffold00056.137

Description : Cytoskeleton.microfilament network.actin polymerisation.profilin actin nucleation protein


Gene families : OG0000183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00160320

Target Alias Description ECC score Gene Family Method Actions
Adi_g101735 No alias profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01728 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33142 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13135 No alias profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14096 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31946 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G066200.1 PFN1, PRF1,... profilin actin nucleation protein & original... 0.06 OrthoFinder output from all 47 species
Cre10.g427250 No alias Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Dcu_g29148 No alias profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g41790 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g05880.1 PRF5, LOC_Os06g05880 profilin actin nucleation protein 0.03 OrthoFinder output from all 47 species
Len_g16600 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08402 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24655 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g13930.1 PRF5 profilin actin nucleation protein 0.03 OrthoFinder output from all 47 species
Mp8g06710.1 PFN1, PRF1 profilin actin nucleation protein 0.04 OrthoFinder output from all 47 species
Msp_g38364 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31761 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c18_15960V3.1 PRO2, PFN2,... profilin 2 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000422 PFN3, PRF3 profilin actin nucleation protein & original... 0.03 OrthoFinder output from all 47 species
Sam_g43769 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23508 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50667 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036481_P001 PRF5, Zm00001e036481 profilin actin nucleation protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0030036 actin cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR005455 PFN 2 126
No external refs found!