AMTR_s00056p00213690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.205

Description : Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00213690

Target Alias Description ECC score Gene Family Method Actions
AT5G11130 No alias Exostosin family protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene06027.t1 Aspi01Gene06027 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene06028.t1 Aspi01Gene06028 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0015.g013977 No alias not classified & original description: CDS=110-1354 0.04 OrthoFinder output from all 47 species
Ceric.14G043500.1 Ceric.14G043500 not classified & original description: pacid=50633043... 0.02 OrthoFinder output from all 47 species
Dde_g09994 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012805001 No alias Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01012807001 No alias Cell... 0.01 OrthoFinder output from all 47 species
GSVIVT01015330001 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_30302 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Ore_g30444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024189 No alias not classified & original description: CDS=1-1338 0.01 OrthoFinder output from all 47 species
Spa_g11975 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51812 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e033023_P001 Zm00001e033023 xylogalacturonan xylosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR004263 Exostosin 97 374
No external refs found!