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  5. AMTR_s00056p00219240

AMTR_s00056p00219240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.217

No description available


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00219240
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273020 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00129630 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00101p00036420 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00043260 No alias No description available 0.06 OrthoFinder output from all 47 species
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT3G25505 No alias No description available 0.02 OrthoFinder output from all 47 species
AT5G17680 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 OrthoFinder output from all 47 species
Adi_g058574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23547 LAZ5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24064 LAZ5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_16090 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_31442 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_33283 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_172867g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_180319g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_31007g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g47005 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g014840.3.1 Solyc01g014840 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc11g011080.3.1 Solyc11g011080 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 62 110
No external refs found!