AMTR_s00056p00228640 (MRP6, ATMRP6, ABCC8,...)

Aliases : MRP6, ATMRP6, ABCC8, evm_27.TU.AmTr_v1.0_scaffold00056.232

Description : ABC transporter C family member 8 OS=Arabidopsis thaliana

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00056p00228640
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00164500	evm_27.TU.AmTr_v1...	ABC transporter C family member 5 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Adi_g056548	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g27220	ABCC12, MRP13, ATMRP13	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g18327	ABCC7, ATMRP7, MRP7	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene09682.t1	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene26287.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene35720.t1	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64347.t1	Aspi01Gene64347	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0007.g010546	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: CDS=81-4649	0.05	OrthoFinder output from all 47 species
Azfi_s0011.g012714	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=165-4181	0.03	OrthoFinder output from all 47 species
Cba_g16239	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.18G065700.1	EST3, MRP4,...	subfamily ABCC transporter & original description:...	0.03	OrthoFinder output from all 47 species
GSVIVT01010326001	ABCC3, ATMRP3, MRP3	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01019469001	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
GSVIVT01019475001	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.07	OrthoFinder output from all 47 species
Gb_14726	MRP6, ATMRP6, ABCC8	ABC transporter C family member 8 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_38871	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
LOC_Os11g05700.1	ATMRP14, ABCC10,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Len_g10742	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Len_g24324	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Len_g51185	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Mp7g13400.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Msp_g15260	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g08952	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15997	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g54907	MRP9, ABCC9, ATMRP9	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016579	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: CDS=1-4848	0.02	OrthoFinder output from all 47 species
Smo405957	AtABCC2, ABCC2,...	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Solyc09g075020.3.1	EST3, MRP4,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Solyc11g065720.2.1	ATMRP14, ABCC10,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Solyc12g036160.3.1	AtABCC2, ABCC2,...	ABC transporter C family member 2 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Tin_g04760	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g41487	MRP11, ABCC13, ATMRP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e038918_P002	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	106	185

External Links

No external refs found!

AMTR_s00056p00228640 (MRP6, ATMRP6, ABCC8,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation