AMTR_s00057p00022490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.6

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL27 component


Gene families : OG0002147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002147_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00022490

Target Alias Description ECC score Gene Family Method Actions
Ala_g21871 No alias component *(bL27m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.20G000500.1 Ceric.20G000500 component *(bL27m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Gb_01579 No alias component mtRPL27 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Nbi_g22941 No alias component *(bL27m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc08g068220.3.1 Solyc08g068220 component mtRPL27 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Solyc11g071320.2.1 Solyc11g071320 component mtRPL27 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Spa_g50933 No alias component *(bL27m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 42 122
No external refs found!