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  5. AMTR_s00057p00049120

AMTR_s00057p00049120 (ATBXL2, BXL2,...)


Aliases : ATBXL2, BXL2, evm_27.TU.AmTr_v1.0_scaffold00057.26

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase


Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00049120
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00088730 XYL4, ATBXL4,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AT3G19620 No alias Glycosyl hydrolase family protein 0.02 OrthoFinder output from all 47 species
AT5G49360 ATBXL1, BXL1 beta-xylosidase 1 0.03 OrthoFinder output from all 47 species
Ala_g25839 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11706 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28516.t1 Aspi01Gene28516 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035699 XYL4, ATBXL4 EC_3.2 glycosylase & original description: CDS=220-2613 0.05 OrthoFinder output from all 47 species
Ceric.31G017600.1 Ceric.31G017600 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G017800.1 Ceric.31G017800 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g12740 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009003001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01017658001 BXL3, BX3, XYL3,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01017659001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01028104001 ATBXL2, BXL2 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
Gb_31967 No alias bifunctional alpha-L-arabinofuranosidase and... 0.06 OrthoFinder output from all 47 species
Gb_32463 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.05 OrthoFinder output from all 47 species
Gb_34864 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.06 OrthoFinder output from all 47 species
Gb_39728 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
LOC_Os01g19220.1 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
LOC_Os02g51620.1 LOC_Os02g51620 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
LOC_Os11g44950.2 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Len_g45367 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29235 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_102349g0010 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
MA_10430067g0010 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.05 OrthoFinder output from all 47 species
Msp_g10167 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19793 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25216 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29023 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03154 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g079570.3.1 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Solyc04g072850.4.1 Solyc04g072850 bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
Tin_g08893 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007432_P001 Zm00001e007432 bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
Zm00001e008876_P002 Zm00001e008876 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Zm00001e037605_P001 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 396 627
IPR026891 Fn3-like 689 756
IPR001764 Glyco_hydro_3_N 65 352
No external refs found!