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  5. AMTR_s00057p00108840

AMTR_s00057p00108840 (ARR1, RR1,...)


Aliases : ARR1, RR1, evm_27.TU.AmTr_v1.0_scaffold00057.85

Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00108840

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene27417.t1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001336.2 No alias Two-component response regulator ARR1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g08391 LUX, PCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g67770.1 ARR11, LOC_Os01g67770 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Len_g14226 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
MA_103946g0010 RR2, ARR2 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
MA_7459g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g20416 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02352 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11607 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Smo90720 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003682 chromatin binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 19 127
IPR001005 SANT/Myb 201 251
No external refs found!