AMTR_s00057p00129680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.110

Description : Multi-process regulation.Rop GTPase regulatory system.RopGAP GTPase-activating protein


Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00129680

Target Alias Description ECC score Gene Family Method Actions
AT1G08340 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.05 OrthoFinder output from all 47 species
AT3G11490 No alias rac GTPase activating protein 0.01 OrthoFinder output from all 47 species
AT4G03100 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.12 OrthoFinder output from all 47 species
Als_g08802 No alias ROP-activating protein *(RopGAP) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05032 No alias ROP-activating protein *(RopGAP) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25512 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05177.t2 Aspi01Gene05177 ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000579 No alias ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025995 No alias ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038659 No alias ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s1557.g104316 No alias ROP-activating protein *(RopGAP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.07G082200.1 Ceric.07G082200 ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g05570 No alias ROP-activating protein *(RopGAP) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g11578 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06070 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033865001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
GSVIVT01036109001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
LOC_Os02g45600.1 LOC_Os02g45600 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g48790.1 LOC_Os04g48790 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species
LOC_Os07g22580.1 LOC_Os07g22580 ROP-activating protein (RopGAP) 0.09 OrthoFinder output from all 47 species
LOC_Os12g34840.1 LOC_Os12g34840 ROP-activating protein (RopGAP) 0.09 OrthoFinder output from all 47 species
Lfl_g39497 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06901 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08581 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10962 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35101 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30150 No alias ROP-activating protein *(RopGAP) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002103 No alias ROP-activating protein *(RopGAP) & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005777 No alias ROP-activating protein *(RopGAP) & original description:... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006099 No alias ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012358 No alias ROP-activating protein *(RopGAP) & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g02926 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo13019 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
Solyc06g084450.4.1 Solyc06g084450 ROP-activating protein (RopGAP) 0.09 OrthoFinder output from all 47 species
Solyc11g068520.3.1 Solyc11g068520 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
Spa_g04743 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12214 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45662 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44395 No alias ROP-activaTing protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018302_P003 Zm00001e018302 ROP-activating protein (RopGAP) 0.1 OrthoFinder output from all 47 species
Zm00001e033341_P001 Zm00001e033341 ROP-activating protein (RopGAP) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000095 CRIB_dom 66 101
IPR000198 RhoGAP_dom 129 265
No external refs found!