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  5. AMTR_s00058p00082800

AMTR_s00058p00082800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.44

No description available


Gene families : OG0001902 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00082800

Target Alias Description ECC score Gene Family Method Actions
AT1G13970 No alias Protein of unknown function (DUF1336) 0.12 OrthoFinder output from all 47 species
Adi_g030649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67571.t3 CW14, Aspi01Gene67571 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0115.g046261 CW14 not classified & original description: CDS=13-1689 0.02 OrthoFinder output from all 47 species
Azfi_s1538.g104281 CW14 not classified & original description: CDS=1-723 0.03 OrthoFinder output from all 47 species
Cba_g03348 CW14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G084800.1 Ceric.21G084800 not classified & original description: pacid=50604432... 0.03 OrthoFinder output from all 47 species
Dac_g01680 CW14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09064 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32018 CW14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g067040.3.1 Solyc02g067040 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc02g088320.4.1 Solyc02g088320 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc03g065200.4.1 Solyc03g065200 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e002036_P002 Zm00001e002036 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Zm00001e003007_P001 Zm00001e003007 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009769 EDR2_C 387 628
No external refs found!