Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.84
Description : Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana
Gene families : OG0004436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004436_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ceric.12G016900.1 | Ceric.12G016900 | component *(ARRS1) of ARPF2-ARRS1 complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000215.62 | No alias | Ribosome biogenesis regulatory protein homolog... | 0.02 | OrthoFinder output from all 47 species | |
| Cre01.g020950 | No alias | Ribosome biogenesis regulatory protein homolog... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g03666 | No alias | component *(ARRS1) of ARPF2-ARRS1 complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027072001 | No alias | Ribosome biogenesis regulatory protein homolog... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_25591 | No alias | component ARRS1 of ARPF2-ARRS1 complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g58830.1 | LOC_Os04g58830 | component ARRS1 of ARPF2-ARRS1 complex | 0.07 | OrthoFinder output from all 47 species | |
| Len_g15602 | No alias | component *(ARRS1) of ARPF2-ARRS1 complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g16458 | No alias | component *(ARRS1) of ARPF2-ARRS1 complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g07840.1 | No alias | component ARRS1 of ARPF2-ARRS1 complex | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g56752 | No alias | component *(ARRS1) of ARPF2-ARRS1 complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29092 | No alias | component *(ARRS1) of ARPF2-ARRS1 complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07664 | No alias | component *(ARRS1) of ARPF2-ARRS1 complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e025915_P002 | Zm00001e025915 | component ARRS1 of ARPF2-ARRS1 complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEA | Interproscan |
| BP | GO:0042254 | ribosome biogenesis | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007023 | Ribosom_reg | 2 | 164 |
| No external refs found! |
