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  5. AMTR_s00058p00133630

AMTR_s00058p00133630 (ATGLK1, GPRI1, GLK1,...)


Aliases : ATGLK1, GPRI1, GLK1, evm_27.TU.AmTr_v1.0_scaffold00058.96

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0001485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00133630
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT2G20570 ATGLK1, GPRI1, GLK1 GBF's pro-rich region-interacting factor 1 0.02 OrthoFinder output from all 47 species
AT5G44190 GPRI2, ATGLK2, GLK2 GOLDEN2-like 2 0.05 OrthoFinder output from all 47 species
Aev_g07283 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g12665 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33376.t2 GPRI2, ATGLK2,... GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0170.g055586 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0487.g073465 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.01G106700.1 GPRI2, ATGLK2,... not classified & original description: pacid=50592712... 0.05 OrthoFinder output from all 47 species
Ceric.21G073900.1 GPRI2, ATGLK2,... GARP subgroup GLK transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g16068 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g13493 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01020604001 ATGLK1, GPRI1, GLK1 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
LOC_Os01g13740.1 ATGLK1, GPRI1,... G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os06g24070.1 ATGLK1, GPRI1,... G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Lfl_g07798 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g32592 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g36232 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g18772 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g61854 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g33226 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g04268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo428906 APRR2, PRR2 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Zm00001e016357_P002 ATGLK1, GPRI1,... G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e036073_P002 GPRI2, ATGLK2,... G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 192 241
No external refs found!