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  5. AMTR_s00058p00210070

AMTR_s00058p00210070 (TMO6,...)


Aliases : TMO6, evm_27.TU.AmTr_v1.0_scaffold00058.221

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00210070

Target Alias Description ECC score Gene Family Method Actions
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.03 OrthoFinder output from all 47 species
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G38000 DOF4.7 DNA binding with one finger 4.7 0.03 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.03 OrthoFinder output from all 47 species
Adi_g024682 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058001 OBP4 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g067547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078152 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086178 OBP4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g04622 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39679 CDF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03761 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06838 DAG1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20563 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18633 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26374.t1 Aspi01Gene26374 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30375.t1 OBP4, Aspi01Gene30375 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47016.t1 CDF2, Aspi01Gene47016 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66325.t1 OBP3, Aspi01Gene66325 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0092.g043142 CDF2 transcription factor *(DOF) & original description: CDS=1-2133 0.04 OrthoFinder output from all 47 species
Cba_g00291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11407 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g39110 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G083700.1 OBP4, Ceric.14G083700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G046000.1 OBP4, Ceric.35G046000 transcription factor *(DOF) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g07953 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03345 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10677 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13892 OBP1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16037 ADOF2, DOF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26661 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27128 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28279 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005057001 TMO6 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01011138001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01016538001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
GSVIVT01016887001 ADOF1, DOF1 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Gb_07177 CDF2 transcription factor (DOF) 0.07 OrthoFinder output from all 47 species
LOC_Os04g47990.1 LOC_Os04g47990 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
LOC_Os07g32510.1 TMO6, LOC_Os07g32510 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Len_g10120 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01681 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26281 OBP4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
MA_56828g0010 No alias transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Msp_g15852 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32354 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g02334 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19321 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38953 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03879 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06748 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41458 OBP4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01905 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18526 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32406 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05155 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09266 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32547 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1128 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012351 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1632 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517 CDF3 transcription factor *(DOF) & original description: CDS=154-1659 0.03 OrthoFinder output from all 47 species
Sam_g43145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49468 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g077960.3.1 TMO6, Solyc02g077960 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc04g070960.3.1 Solyc04g070960 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc05g054510.2.1 OBP3, Solyc05g054510 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc06g071480.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc11g010940.2.1 Solyc11g010940 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Spa_g05594 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54524 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14914 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20763 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e015597_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e019172_P001 Zm00001e019172 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e027634_P002 OBP3, Zm00001e027634 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e031750_P001 Zm00001e031750 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e035074_P001 TMO6, Zm00001e035074 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 17 76
No external refs found!