Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.130
Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF1A PIC assembly factor
Gene families : OG0002330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002330_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g024760 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g08163 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0036.g025777 | No alias | assembly factor (eIF1A) of eIF1 & original description: CDS=1-438 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10969 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g49264 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g23440.1 | LOC_Os06g23440 | assembly factor (eIF1A) of eIF1 | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g30569 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g04190.1 | No alias | assembly factor (eIF1A) of eIF1 | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09895 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g25277 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g03034 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16376 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014127_P001 | Zm00001e014127 | assembly factor (eIF1A) of eIF1 | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| MF | GO:0003743 | translation initiation factor activity | IEA | Interproscan |
| BP | GO:0006413 | translational initiation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006196 | RNA-binding_domain_S1_IF1 | 30 | 94 |
| No external refs found! |
