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  5. AMTR_s00059p00208110

AMTR_s00059p00208110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.240

Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.component PetM/VII


Gene families : OG0007944 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007944_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00208110
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT2G26500 No alias cytochrome b6f complex subunit (petM), putative 0.05 OrthoFinder output from all 47 species
Ala_g12927 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.05 OrthoFinder output from all 47 species
Als_g54693 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.02 OrthoFinder output from all 47 species
Aop_g09963 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025256 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.07 OrthoFinder output from all 47 species
Ceric.32G011800.1 Ceric.32G011800 component *(PetM/VII) of cytochrome b6/f complex &... 0.06 OrthoFinder output from all 47 species
Dcu_g00281 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01009587001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
LOC_Os03g55720.2 LOC_Os03g55720 component PetM/VII of cytochrome b6/f complex 0.05 OrthoFinder output from all 47 species
Len_g11628 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Len_g29641 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.05 OrthoFinder output from all 47 species
MA_10294942g0010 No alias component PetM/VII of cytochrome b6/f complex 0.04 OrthoFinder output from all 47 species
Mp1g07170.1 No alias component PetM/VII of cytochrome b6/f complex 0.02 OrthoFinder output from all 47 species
Nbi_g20551 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Pir_g19323 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Pp3c6_20300V3.1 Pp3c6_20300 cytochrome b6f complex subunit (petM), putative 0.02 OrthoFinder output from all 47 species
Solyc01g109040.4.1 Solyc01g109040 component PetM/VII of cytochrome b6/f complex 0.05 OrthoFinder output from all 47 species
Tin_g27169 No alias component *(PetM/VII) of cytochrome b6/f complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e011966_P002 Zm00001e011966 component PetM/VII of cytochrome b6/f complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009512 cytochrome b6f complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR012595 PetM_cyt_b6/f_cplx_su7 87 113
No external refs found!