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  5. AMTR_s00061p00068850

AMTR_s00061p00068850 (ATUBC11, UBC11,...)


Aliases : ATUBC11, UBC11, evm_27.TU.AmTr_v1.0_scaffold00061.43

Description : Protein degradation.peptide tagging.Membrane-anchored-Ubiquitin (MUB)-anchor addition.UBC-subclass-6 conjugation E2 protein


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00068850
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT1G64230 UBC28 ubiquitin-conjugating enzyme 28 0.03 OrthoFinder output from all 47 species
AT2G16740 UBC29 ubiquitin-conjugating enzyme 29 0.03 OrthoFinder output from all 47 species
AT5G41700 ATUBC8, UBC8 ubiquitin conjugating enzyme 8 0.04 OrthoFinder output from all 47 species
AT5G53300 UBC10 ubiquitin-conjugating enzyme 10 0.03 OrthoFinder output from all 47 species
Aev_g05825 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18393 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43928 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46782 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0155.g053654 UBC9 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Dac_g34614 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014758001 UBC10 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
GSVIVT01028729001 UBC10 Protein degradation.peptide... 0.04 OrthoFinder output from all 47 species
Lfl_g04471 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05219 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
MA_10437205g0010 ATUBC11, UBC11 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
MA_194g0030 ATUBC11, UBC11 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
MA_725251g0010 UBC10 Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp3g18170.1 ATUBC11, UBC11 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Pnu_g12242 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006304 UBC10 E2 MUB ubiquitin-conjugating enzyme & original... 0.02 OrthoFinder output from all 47 species
Solyc07g066080.3.1 ATUBC11, UBC11,... conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Spa_g31608 UBC31 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g35317 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g36347 UBC3 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!