Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.62
No description available
Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00085p00102880 | RPP13,... | Disease resistance protein RPM1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G58400 | No alias | Disease resistance protein (CC-NBS-LRR class) family | 0.03 | OrthoFinder output from all 47 species | |
| AT3G46730 | No alias | NB-ARC domain-containing disease resistance protein | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012169001 | RPM1, RPS3 | Disease resistance protein RPM1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018564001 | No alias | Putative disease resistance RPP13-like protein 3... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032830001 | No alias | Probable disease resistance RPP8-like protein 2... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08485 | RPP13 | Putative disease resistance protein At1g58400... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_25817 | No alias | Putative disease resistance protein At1g58400... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g02120.1 | LOC_Os04g02120 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g03570.1 | LOC_Os10g03570 | no description available(sp|q2r8l1|rga5s_orysj : 283.0) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g11950.1 | RPM1, RPS3,... | Disease resistance protein RPM1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g15500.1 | LOC_Os11g15500 | no description available(sp|f7j0n2|rga5r_orysj : 369.0) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g31620.1 | RPM1, RPS3,... | Disease resistance protein RPM1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g31525 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g009250.1.1 | RPP13, Solyc04g009250 | Disease resistance protein RPP13 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g009660.2.1 | RPP13, Solyc04g009660 | Disease resistance protein RPP13 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g053020.3.1 | ZAR1, Solyc07g053020 | Disease resistance RPP13-like protein 4 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc08g005440.3.1 | RPM1, RPS3,... | RPM1 effector-triggered immunity CC-NLR-type effector receptor | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e008806_P001 | Zm00001e008806 | no description available(sp|q2r8l1|rga5s_orysj : 238.0) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024479_P001 | RPM1, RPS3,... | Disease resistance protein RPM1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
