AMTR_s00061p00152710 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.136

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00061p00152710

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00090p00137350	RPP13,...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.26	RPM1, RPS3	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Gb_26463	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.05	OrthoFinder output from all 47 species
LOC_Os06g48520.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os09g09490.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os11g14380.1	LOC_Os11g14380	no description available(sp\|q2r8l1\|rga5s_orysj : 414.0)	0.04	OrthoFinder output from all 47 species
Solyc04g009240.2.1	RPP13, Solyc04g009240	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc04g009290.1.1	RPP13, Solyc04g009290	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Zm00001e024479_P001	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e030083_P004	ZAR1, Zm00001e030083	no description available(sp\|q2r8l1\|rga5s_orysj : 364.0)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	102	391

External Links

No external refs found!