AMTR_s00061p00158010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.145

Description : Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00158010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00127120 CRR22,... Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.06 OrthoFinder output from all 47 species
Adi_g003829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035684 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098075 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10387 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16836 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31168 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g36227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06770 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19105 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g45822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g28240 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g29683 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01012.t1 REME1, Aspi01Gene01012 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01199.t1 OTP86, Aspi01Gene01199 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene04806.t1 Aspi01Gene04806 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene18627.t1 Aspi01Gene18627 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21013.t1 CRR22, Aspi01Gene21013 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23085.t1 Aspi01Gene23085 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene31490.t1 Aspi01Gene31490 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34698.t1 Aspi01Gene34698 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70275.t1 Aspi01Gene70275 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007645 OTP86 not classified & original description: CDS=47-2665 0.07 OrthoFinder output from all 47 species
Azfi_s0003.g008050 No alias not classified & original description: CDS=1-3306 0.02 OrthoFinder output from all 47 species
Azfi_s0052.g031587 No alias not classified & original description: CDS=171-3077 0.02 OrthoFinder output from all 47 species
Azfi_s0073.g037197 No alias not classified & original description: CDS=1-1461 0.07 OrthoFinder output from all 47 species
Azfi_s0092.g043152 No alias not classified & original description: CDS=1-744 0.03 OrthoFinder output from all 47 species
Azfi_s0126.g048645 No alias not classified & original description: CDS=1-2262 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048869 No alias not classified & original description: CDS=1-2157 0.02 OrthoFinder output from all 47 species
Azfi_s0141.g051350 No alias not classified & original description: CDS=124-2304 0.01 OrthoFinder output from all 47 species
Azfi_s0309.g064088 No alias not classified & original description: CDS=1-441 0.02 OrthoFinder output from all 47 species
Azfi_s0934.g093088 No alias not classified & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Cba_g04037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45888 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g24501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44564 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g07680 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13517 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16797 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g19270 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22287 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38407 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48674 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03997 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04001 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g05950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15555 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15898 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g49826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022208001 No alias Pentatricopeptide repeat-containing protein At4g19191,... 0.05 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g03808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36740 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07044 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g03892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14800 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03036 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g65840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15725 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g15729 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g23601 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g32978 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g07557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31163 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g33128 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g63100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001529 SLO1 not classified & original description: CDS=1-1572 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009070 No alias not classified & original description: CDS=1-2223 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018468 No alias solute transporter *(MTCC) & original description: CDS=2675-4273 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019337 No alias not classified & original description: CDS=1-3108 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021689 No alias S-adenosyl methionine transporter *(GOSAMT) & original... 0.01 OrthoFinder output from all 47 species
Smo108616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo123450 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo124564 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
Smo96526 CRR2 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Solyc12g096680.1.1 REME1, Solyc12g096680 Pentatricopeptide repeat-containing protein At2g03880,... 0.02 OrthoFinder output from all 47 species
Spa_g08436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06120 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06494 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25577 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30444 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32449 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g43995 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44607 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g45487 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 259 280
IPR002885 Pentatricopeptide_repeat 186 211
IPR002885 Pentatricopeptide_repeat 158 182
IPR002885 Pentatricopeptide_repeat 83 128
No external refs found!