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  5. AMTR_s00061p00165330

AMTR_s00061p00165330 (RPM1, RPS3,...)


Aliases : RPM1, RPS3, evm_27.TU.AmTr_v1.0_scaffold00061.167

Description : Disease resistance protein RPP13 OS=Arabidopsis thaliana


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00165330
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00263750 HRT, RCY1, RPP8,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00085p00102880 RPP13,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00148p00037160 ZAR1,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.06 OrthoFinder output from all 47 species
AT1G58390 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G58807 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G58848 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G59124 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G59218 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.07 OrthoFinder output from all 47 species
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
AT3G46730 No alias NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.04 OrthoFinder output from all 47 species
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
GSVIVT01007238001 HRT, RCY1, RPP8 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01018564001 No alias Putative disease resistance RPP13-like protein 3... 0.07 OrthoFinder output from all 47 species
GSVIVT01032824001 No alias Putative disease resistance protein At1g50180... 0.03 OrthoFinder output from all 47 species
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.03 OrthoFinder output from all 47 species
LOC_Os01g23380.1 RPP13, LOC_Os01g23380 no description available(sp|p0do08|pikm2_orysj : 348.0) 0.03 OrthoFinder output from all 47 species
LOC_Os04g21890.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g22460.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28470.1 LOC_Os08g28470 no description available(sp|q2qzf1|pik6_orysj : 108.0) 0.03 OrthoFinder output from all 47 species
LOC_Os08g29854.1 LOC_Os08g29854 no description available(sp|q2r8l1|rga5s_orysj : 340.0) 0.02 OrthoFinder output from all 47 species
LOC_Os08g32880.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.04 OrthoFinder output from all 47 species
LOC_Os10g07534.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g12300.1 LOC_Os11g12300 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g13510.1 RPM1, RPS3,... no description available(sp|f7j0n2|rga5r_orysj : 243.0) 0.02 OrthoFinder output from all 47 species
LOC_Os12g17090.1 LOC_Os12g17090 no description available(sp|f7j0n2|rga5r_orysj : 305.0) 0.04 OrthoFinder output from all 47 species
LOC_Os12g17430.1 LOC_Os12g17430 no description available(sp|p0do08|pikm2_orysj : 108.0) 0.03 OrthoFinder output from all 47 species
LOC_Os12g31620.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g37770.1 LOC_Os12g37770 no description available(sp|f7j0n2|rga5r_orysj : 437.0) 0.02 OrthoFinder output from all 47 species
Solyc03g005650.1.1 Solyc03g005650 Probable disease resistance protein At1g58390... 0.03 OrthoFinder output from all 47 species
Solyc04g009250.1.1 RPP13, Solyc04g009250 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g009260.3.1 Solyc04g009260 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g009290.1.1 RPP13, Solyc04g009290 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g009660.2.1 RPP13, Solyc04g009660 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc07g053020.3.1 ZAR1, Solyc07g053020 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g005440.3.1 RPM1, RPS3,... RPM1 effector-triggered immunity CC-NLR-type effector receptor 0.06 OrthoFinder output from all 47 species
Zm00001e011204_P001 Zm00001e011204 no description available(sp|q2r8l1|rga5s_orysj : 371.0) 0.03 OrthoFinder output from all 47 species
Zm00001e011354_P001 Zm00001e011354 no description available(sp|p0do08|pikm2_orysj : 121.0) 0.03 OrthoFinder output from all 47 species
Zm00001e018195_P001 Zm00001e018195 no description available(sp|q2r8l1|rga5s_orysj : 399.0) 0.02 OrthoFinder output from all 47 species
Zm00001e024479_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039751_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004555 alpha,alpha-trehalase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0015927 trehalase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 179 366
No external refs found!