1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00062p00017730

AMTR_s00062p00017730 (XTR3, XTH25,...)


Aliases : XTR3, XTH25, evm_27.TU.AmTr_v1.0_scaffold00062.3

Description : Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana


Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00017730

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00199270 XTH16,... Enzyme classification.EC_2 transferases.EC_2.4... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00199520 XTH16,... Enzyme classification.EC_2 transferases.EC_2.4... 0.03 OrthoFinder output from all 47 species
AT4G14130 XTR7, XTH15 xyloglucan endotransglucosylase/hydrolase 15 0.03 OrthoFinder output from all 47 species
AT4G25810 XTR6, XTH23 xyloglucan endotransglycosylase 6 0.03 OrthoFinder output from all 47 species
AT4G30280 XTH18, ATXTH18 xyloglucan endotransglucosylase/hydrolase 18 0.03 OrthoFinder output from all 47 species
AT5G57550 XTR3, XTH25 xyloglucan endotransglucosylase/hydrolase 25 0.03 OrthoFinder output from all 47 species
AT5G57560 TCH4, XTH22 Xyloglucan endotransglucosylase/hydrolase family protein 0.03 OrthoFinder output from all 47 species
Adi_g007236 XTH7 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013087 XTH5, EXGT-A4 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024420 XTH16 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074219 XTH5, EXGT-A4 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08627 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g12306 XTH6 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29536 XTH8 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09914 XTH5, EXGT-A4 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05948 XTH16 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37001 XTH9 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16091.t1 XTH6, Aspi01Gene16091 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18628.t1 XTH5, EXGT-A4,... EC_2.4 glycosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene35717.t1 XTH5, EXGT-A4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39137.t1 XTH5, EXGT-A4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41924.t1 XTH5, EXGT-A4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58698.t1 XTH6, Aspi01Gene58698 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14777 XTH5, EXGT-A4 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G006300.1 XTH5, EXGT-A4,... EC_2.4 glycosyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g09803 XTH13, AtXTH13 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21095 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03729 XTR3, XTH25 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33284 XTH5, EXGT-A4 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48440 XTH5, EXGT-A4 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30469 XTH6 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029171001 XTR6, XTH23 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
GSVIVT01029173001 XTR6, XTH23 Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
Gb_04137 XTR6, XTH23 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Gb_05960 XTR6, XTH23 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Gb_10038 XTR6, XTH23 Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine... 0.03 OrthoFinder output from all 47 species
Gb_10718 TCH4, XTH22 Xyloglucan endotransglucosylase/hydrolase protein 22... 0.03 OrthoFinder output from all 47 species
Gb_22327 XTH5, EXGT-A4 Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder output from all 47 species
Gb_22329 XTH9 Xyloglucan endotransglucosylase/hydrolase protein 9... 0.03 OrthoFinder output from all 47 species
Gb_27791 XTR6, XTH23 Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine... 0.03 OrthoFinder output from all 47 species
Gb_34730 XTH5, EXGT-A4 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Gb_38322 XTR6, XTH23 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
LOC_Os04g51450.1 XTR3, XTH25,... Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
LOC_Os04g51460.1 MERI5B, XTH24,... Xyloglucan endotransglucosylase/hydrolase protein 24... 0.03 OrthoFinder output from all 47 species
LOC_Os06g48200.1 XTR3, XTH25,... Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
LOC_Os08g13980.1 TCH4, XTH22,... Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine... 0.02 OrthoFinder output from all 47 species
LOC_Os11g33270.1 XTH5, EXGT-A4,... Probable xyloglucan endotransglucosylase/hydrolase... 0.04 OrthoFinder output from all 47 species
Len_g19223 XTH5, EXGT-A4 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429505g0010 XTR6, XTH23 Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine... 0.03 OrthoFinder output from all 47 species
MA_10429607g0020 XTR6, XTH23 Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine... 0.03 OrthoFinder output from all 47 species
MA_10432086g0010 XTR6, XTH23 Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine... 0.04 OrthoFinder output from all 47 species
MA_254951g0010 XTH10 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
MA_262267g0010 XTH9 Xyloglucan endotransglucosylase/hydrolase protein 9... 0.02 OrthoFinder output from all 47 species
MA_342978g0010 TCH4, XTH22 Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine... 0.03 OrthoFinder output from all 47 species
MA_476450g0010 XTH6 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Mp2g02380.1 XTH7 Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder output from all 47 species
Mp2g18350.1 XTH7 Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder output from all 47 species
Nbi_g17055 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28724 XTH9 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30409 XTH6 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01794 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012055 XTH16 EC_2.4 glycosyltransferase & original description: CDS=448-1341 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0272.g027035 TCH4, XTH22 EC_2.4 glycosyltransferase & original description: CDS=150-1208 0.03 OrthoFinder output from all 47 species
Sam_g08570 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g099630.4.1 XTH5, EXGT-A4,... Probable xyloglucan endotransglucosylase/hydrolase 1... 0.03 OrthoFinder output from all 47 species
Solyc01g106650.3.1 XTH10, Solyc01g106650 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Solyc03g093080.3.1 XTR6, XTH23,... Probable xyloglucan endotransglucosylase/hydrolase... 0.07 OrthoFinder output from all 47 species
Solyc03g093110.3.1 XTR6, XTH23,... Probable xyloglucan endotransglucosylase/hydrolase... 0.07 OrthoFinder output from all 47 species
Solyc03g093120.5.1.1 XTR6, XTH23,... Probable xyloglucan endotransglucosylase/hydrolase... 0.06 OrthoFinder output from all 47 species
Solyc03g093130.3.1 XTR6, XTH23,... Probable xyloglucan endotransglucosylase/hydrolase... 0.04 OrthoFinder output from all 47 species
Solyc05g046290.3.1 XTR6, XTH23,... Probable xyloglucan endotransglucosylase/hydrolase... 0.06 OrthoFinder output from all 47 species
Solyc07g006860.3.1 TCH4, XTH22,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Solyc07g056000.2.1 XTR7, XTH15,... Xyloglucan endotransglucosylase/hydrolase protein 15... 0.04 OrthoFinder output from all 47 species
Solyc12g017240.2.1 XTR7, XTH15,... Xyloglucan endotransglucosylase/hydrolase protein 15... 0.07 OrthoFinder output from all 47 species
Spa_g13771 XTH5, EXGT-A4 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007027_P003 XTH16, Zm00001e007027 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Zm00001e007028_P001 MERI5B, XTH24,... Xyloglucan endotransglucosylase/hydrolase protein 24... 0.05 OrthoFinder output from all 47 species
Zm00001e013131_P001 TCH4, XTH22,... Xyloglucan endotransglucosylase/hydrolase protein 22... 0.03 OrthoFinder output from all 47 species
Zm00001e040081_P001 TCH4, XTH22,... Xyloglucan endotransglycosylase/hydrolase protein 8... 0.03 OrthoFinder output from all 47 species
Zm00001e041590_P001 XTH16, Zm00001e041590 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEA Interproscan
BP GO:0006073 cellular glucan metabolic process IEA Interproscan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA Interproscan
CC GO:0048046 apoplast IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010713 XET_C 51 97
No external refs found!