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  5. AMTR_s00062p00185880

AMTR_s00062p00185880 (CH-CPN60A, CPN60A,...)


Aliases : CH-CPN60A, CPN60A, SLP, evm_27.TU.AmTr_v1.0_scaffold00062.184

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein


Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00185880
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00080200 CH-CPN60A,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.04 OrthoFinder output from all 47 species
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.06 OrthoFinder output from all 47 species
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.03 OrthoFinder output from all 47 species
AT5G18820 EMB3007 TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Adi_g008941 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g008942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013083 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013893 CH-CPN60A, CPN60A, SLP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058751 CH-CPN60A, CPN60A, SLP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g114645 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g09354 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g11289 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02236 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07607 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09249 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10775 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11846 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.08 OrthoFinder output from all 47 species
Als_g26318 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39081 CPN60B, LEN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07890 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08982 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31738 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02895 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000356 No alias chaperone *(Hsp60) & original description: CDS=314-2140 0.02 OrthoFinder output from all 47 species
Azfi_s0029.g024060 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=155-2068 0.05 OrthoFinder output from all 47 species
Azfi_s0217.g058536 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=281-2059 0.02 OrthoFinder output from all 47 species
Cba_g03270 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03962 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13701 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G061000.1 CH-CPN60A,... chaperone *(Hsp60) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.03G036700.1 CH-CPN60A,... chaperone *(Hsp60) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.10G077900.1 CH-CPN60A,... chaperone *(Hsp60) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G040000.1 Ceric.21G040000 chaperone *(Hsp60) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G022500.1 CPN60B, LEN1,... chaperone *(Hsp60) & original description:... 0.07 OrthoFinder output from all 47 species
Cre04.g231222 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.01 OrthoFinder output from all 47 species
Cre17.g741450 CPN60B, LEN1 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Dac_g09076 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15357 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03921 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08839 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09873 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07618 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26759 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012098001 EMB3007 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
GSVIVT01025490001 No alias External stimuli response.temperature.Hsp... 0.07 OrthoFinder output from all 47 species
GSVIVT01031526001 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
Gb_25193 No alias RuBisCO large subunit-binding protein subunit beta,... 0.02 OrthoFinder output from all 47 species
LOC_Os06g02380.2 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.05 OrthoFinder output from all 47 species
LOC_Os09g38980.1 EMB3007, LOC_Os09g38980 subunit alpha of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
LOC_Os12g17910.1 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Len_g28966 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45333 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59695 CPN60B, LEN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12872 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12886 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28437 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10436772g0010 CH-CPN60A, CPN60A, SLP chaperone (Hsp60) 0.04 OrthoFinder output from all 47 species
MA_587689g0010 CH-CPN60A, CPN60A, SLP RuBisCO large subunit-binding protein subunit alpha... 0.05 OrthoFinder output from all 47 species
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.05 OrthoFinder output from all 47 species
Msp_g06450 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08431 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30013 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08951 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15384 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06617 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09116 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c16_4660V3.1 CPN60B, LEN1, Pp3c16_4660 chaperonin 60 beta 0.02 OrthoFinder output from all 47 species
Pp3c24_12180V3.1 CH-CPN60A,... chaperonin-60alpha 0.02 OrthoFinder output from all 47 species
Pp3c6_20400V3.1 CPN60B, LEN1, Pp3c6_20400 chaperonin 60 beta 0.02 OrthoFinder output from all 47 species
Ppi_g14667 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g40159 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41728 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56884 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001253 CH-CPN60A, CPN60A, SLP regulatory factor SNX2 of Retromer protein recycling... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020651 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=93-1937 0.03 OrthoFinder output from all 47 species
Sam_g15739 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39492 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Smo168153 CPN60B, LEN1 External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
Solyc01g028810.3.1 Solyc01g028810 subunit beta of Cpn60 chaperonin complex. component... 0.06 OrthoFinder output from all 47 species
Solyc03g120850.4.1 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.08 OrthoFinder output from all 47 species
Solyc11g069790.2.1 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.04 OrthoFinder output from all 47 species
Spa_g07167 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09931 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26363 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54235 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g03459 No alias chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12134 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029825_P001 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.11 OrthoFinder output from all 47 species
Zm00001e031536_P001 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.05 OrthoFinder output from all 47 species
Zm00001e037002_P001 CH-CPN60A,... Chaperonin 60 subunit alpha 1, chloroplastic... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 55 554
No external refs found!