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  5. Aev_g06873

Aev_g06873


Description : component *(eL19) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g06873

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00091p00066640 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT1G02780 emb2386 Ribosomal protein L19e family protein 0.05 OrthoFinder output from all 47 species
Aop_g14682 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009570 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.07G087100.1 Ceric.07G087100 component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021181.1 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g41239 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01035096001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os03g21940.1 emb2386, LOC_Os03g21940 component RPL19 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os03g38260.1 LOC_Os03g38260 component RPL19 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Ore_g43770 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c21_11230V3.1 Pp3c21_11230 Ribosomal protein L19e family protein 0.02 OrthoFinder output from all 47 species
Pp3c22_9980V3.1 Pp3c22_9980 Ribosomal protein L19e family protein 0.02 OrthoFinder output from all 47 species
Pp3c9_14720V3.1 Pp3c9_14720 Ribosomal protein L19e family protein 0.02 OrthoFinder output from all 47 species
Sam_g19648 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc06g009210.4.1 emb2386, Solyc06g009210 component RPL19 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc09g075430.3.1 Solyc09g075430 component RPL19 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g11535 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g11536 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e020524_P001 emb2386, Zm00001e020524 component RPL19 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e025202_P001 Zm00001e025202 component RPL19 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e036280_P001 Zm00001e036280 component RPL19 of LSU proteome component 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 1 112
No external refs found!