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  5. AMTR_s00065p00068810

AMTR_s00065p00068810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.36

Description : External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.CIB transcriptional regulator


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00065p00068810
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Aev_g15255 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Als_g32670 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0090.g042718 RSL2 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Nbi_g25662 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Nbi_g33520 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Zm00001e011410_P001 Zm00001e011410 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e015045_P002 Zm00001e015045 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e036408_P003 SPT, Zm00001e036408 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 234 282
No external refs found!