AMTR_s00065p00199650 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.181

No description available

Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00065p00199650
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00263150	evm_27.TU.AmTr_v1...	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
AMTR_s00026p00209160	XTH6,...	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	OrthoFinder output from all 47 species
AMTR_s00026p00217290	XTH6,...	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	OrthoFinder output from all 47 species
AMTR_s00109p00131990	XTH26, ATXTH26,...	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	OrthoFinder output from all 47 species
Dac_g07516	XTH16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_275059g0010	XTH26, ATXTH26	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
MA_9953g0010	XTH6	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Ore_g44298	XTH6	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g07627	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010713	XET_C	46	90

External Links

No external refs found!