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AMTR_s00065p00202980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.187

Description : Reticulon-like protein B21 OS=Arabidopsis thaliana


Gene families : OG0003467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00202980

Target Alias Description ECC score Gene Family Method Actions
AT2G20590 No alias Reticulon family protein 0.08 OrthoFinder output from all 47 species
Aev_g22301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0030.g024361 No alias not classified & original description: CDS=126-2093 0.03 OrthoFinder output from all 47 species
Cba_g05841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020595001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
Gb_25024 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g19990.1 LOC_Os02g19990 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g17870.1 LOC_Os08g17870 Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_22853g0010 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Mp1g14200.1 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Nbi_g18960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007280 No alias not classified & original description: CDS=1-1662 0.03 OrthoFinder output from all 47 species
Spa_g09371 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g51972 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e024730_P001 Zm00001e024730 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003388 Reticulon 335 489
No external refs found!