AMTR_s00066p00145760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.147

No description available


Gene families : OG0002125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002125_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00145760

Target Alias Description ECC score Gene Family Method Actions
Aob_g18832 No alias ribosome docking factor *(MDM38) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13105 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58916.t1 Aspi01Gene58916 ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001490 No alias ribosome docking factor *(MDM38) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G078200.1 Ceric.23G078200 ribosome docking factor *(MDM38) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001286.3 No alias No description available 0.02 OrthoFinder output from all 47 species
Sam_g12234 No alias ribosome docking factor *(MDM38) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04281 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07911 No alias ribosome docking factor *(MDM38) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13833 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22741 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
CC GO:0005938 cell cortex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0032065 maintenance of protein location in cell cortex IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!