Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.61
Description : Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00014p00090010 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00103p00160020 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G14470 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G01510 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005739 | MEF19 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g013355 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g017329 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036755 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g049668 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g088362 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g099240 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g25067 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g24236 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g24705 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g30557 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g38174 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g06363 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06767 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07162 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g26570 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24083 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g27882 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27894 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g36684 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g60598 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene46643.t1 | Aspi01Gene46643 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030697 | No alias | not classified & original description: CDS=1-2361 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0216.g058494 | No alias | not classified & original description: CDS=1-1950 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g04014 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05302 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07780 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15334 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34643 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34771 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g45986 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g72353 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.13G031800.1 | Ceric.13G031800 | not classified & original description: pacid=50636627... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G050000.1 | Ceric.29G050000 | ssDNA-binding protein *(OSB) & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.35G015500.1 | Ceric.35G015500 | not classified & original description: pacid=50580909... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.36G058400.1 | Ceric.36G058400 | not classified & original description: pacid=50568396... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000342.38 | No alias | Pentatricopeptide repeat-containing protein At5g02860... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g24627 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g31659 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g35674 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g39652 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g05649 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08252 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08284 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08431 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g08937 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g16812 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g24237 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g26408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36058 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39633 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g40678 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g47861 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g50046 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22366 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22591 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g24430 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g48000 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06035 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g14557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15613 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31027 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01003453001 | OTP80 | RNA processing.organelle machineries.RNA... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01028697001 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01028819001 | No alias | Pentatricopeptide repeat-containing protein At5g52850,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031849001 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_19040 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os03g58100.1 | OTP85, LOC_Os03g58100 | RNA editing factor (OTP85) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os05g37225.1 | LOC_Os05g37225 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os07g46770.1 | LOC_Os07g46770 | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g03398 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04187 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07378 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07431 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g40816 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_53781g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.01 | OrthoFinder output from all 47 species | |
| MA_863836g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g03763 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g28793 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15684 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g16043 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06420 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03106 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g19109 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g03120 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17865 | REME1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g05115 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29430 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32097 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53684 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g61249 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62708 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002406 | OSB1 | ssDNA-binding protein *(OSB) & original description: CDS=1-324 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003527 | EMB2758 | not classified & original description: CDS=1-1284 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0023.g008810 | No alias | not classified & original description: CDS=1-1683 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g21956 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24777 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27658 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35736 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007850.2.1 | Solyc01g007850 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g079260.2.1 | Solyc02g079260 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g048900.1.1 | Solyc06g048900 | Pentatricopeptide repeat-containing protein At2g40720... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g006990.3.1 | Solyc07g006990 | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc07g042760.1.1 | Solyc07g042760 | Pentatricopeptide repeat-containing protein At4g31070,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g010070.1.1 | EMB2758, Solyc09g010070 | Pentatricopeptide repeat-containing protein At4g33990... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc09g015370.1.1 | Solyc09g015370 | Pentatricopeptide repeat-containing protein At2g27610... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc09g065710.1.1 | OTP86, Solyc09g065710 | RNA editing factor (OTP86) | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03497 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04113 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g06074 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06419 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g12958 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g24321 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g26895 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007600_P001 | Zm00001e007600 | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016151 | nickel cation binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 477 | 500 |
| IPR002885 | Pentatricopeptide_repeat | 378 | 402 |
| IPR002885 | Pentatricopeptide_repeat | 1 | 27 |
| IPR002885 | Pentatricopeptide_repeat | 544 | 572 |
| IPR002885 | Pentatricopeptide_repeat | 200 | 247 |
| IPR002885 | Pentatricopeptide_repeat | 403 | 450 |
| IPR002885 | Pentatricopeptide_repeat | 100 | 148 |
| IPR002885 | Pentatricopeptide_repeat | 302 | 349 |
| No external refs found! |
