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  5. AMTR_s00068p00041900

AMTR_s00068p00041900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.14

No description available


Gene families : OG0000423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00041900

Target Alias Description ECC score Gene Family Method Actions
Als_g07044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03849.t1 Aspi01Gene03849 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13921.t1 Aspi01Gene13921 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42818.t1 Aspi01Gene42818 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43646.t1 Aspi01Gene43646 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g41264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G011400.1 Ceric.07G011400 not classified & original description: pacid=50626447... 0.04 OrthoFinder output from all 47 species
Ceric.23G059200.1 Ceric.23G059200 not classified & original description: pacid=50610161... 0.03 OrthoFinder output from all 47 species
Dac_g00598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g00700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017961001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_16460 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36430 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g68140.1 LOC_Os01g68140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g03809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100150g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_16371g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g00485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g09221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012976 No alias not classified & original description: CDS=1-936 0.03 OrthoFinder output from all 47 species
Sam_g20665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g09068 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018888_P001 Zm00001e018888 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008586 DUF868_pln 3 309
No external refs found!