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  5. AMTR_s00068p00064720

AMTR_s00068p00064720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.26

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS30 component


Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00068p00064720

Target Alias Description ECC score Gene Family Method Actions
AT4G29390 No alias Ribosomal protein S30 family protein 0.03 OrthoFinder output from all 47 species
AT5G56670 No alias Ribosomal protein S30 family protein 0.03 OrthoFinder output from all 47 species
Aop_g34461 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Azfi_s0068.g036442 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.05G056700.1 Ceric.05G056700 component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.33 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre16.g666301 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Dcu_g27544 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g30830 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Gb_16784 No alias component RPS30 of SSU proteome 0.06 OrthoFinder output from all 47 species
Gb_23464 No alias component RPS30 of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os02g56014.1 LOC_Os02g56014 component RPS30 of SSU proteome 0.04 OrthoFinder output from all 47 species
Lfl_g13419 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_10432727g0010 No alias component RPS30 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.05 OrthoFinder output from all 47 species
Pp3c2_28870V3.1 Pp3c2_28870 Ribosomal protein S30 family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_29010V3.1 Pp3c2_29010 Ribosomal protein S30 family protein 0.01 OrthoFinder output from all 47 species
Sam_g35687 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Solyc08g076340.3.1 Solyc08g076340 component RPS30 of SSU proteome 0.09 OrthoFinder output from all 47 species
Solyc12g008700.3.1 Solyc12g008700 component RPS30 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 3 60
No external refs found!