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  5. AMTR_s00068p00188920

AMTR_s00068p00188920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.152

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS20 component


Gene families : OG0006775 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006775_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00068p00188920

Target Alias Description ECC score Gene Family Method Actions
Ala_g08893 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Azfi_s0228.g059056 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.11G009600.1 Ceric.11G009600 component *(bS20c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cre12.g494750 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dcu_g37258 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dde_g15842 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01014290001 No alias Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Gb_27504 No alias component psRPS20 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
LOC_Os01g48690.1 LOC_Os01g48690 component psRPS20 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Len_g00203 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g00868 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Mp7g14740.1 No alias component psRPS20 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Ore_g04849 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pir_g10569 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ppi_g26924 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009139 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g20147 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc07g062870.3.1 Solyc07g062870 component psRPS20 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Spa_g08226 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Spa_g08227 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Spa_g50703 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Tin_g10912 No alias component *(bS20c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e028066_P001 Zm00001e028066 component psRPS20 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002583 Ribosomal_S20 18 104
No external refs found!