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  5. AMTR_s00068p00206630

AMTR_s00068p00206630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.185

Description : Probable xyloglucan galactosyltransferase GT17 OS=Arabidopsis thaliana


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00206630
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Adi_g017997 GT18, ATGT18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14532 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G020100.1 MUR3, KAM1,... 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g13033 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g25023 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g34183 No alias galacturonosyltransferase *(XUT1) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49669 MUR3, KAM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g32110.1 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.04 OrthoFinder output from all 47 species
Lfl_g17868 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_5948g0010 No alias Probable xyloglucan galactosyltransferase GT11... 0.04 OrthoFinder output from all 47 species
MA_73539g0010 GT18, ATGT18 Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_7543346g0010 MUR3, KAM1 Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 OrthoFinder output from all 47 species
Mp6g05660.1 No alias Probable xyloglucan galactosyltransferase GT11... 0.03 OrthoFinder output from all 47 species
Msp_g31441 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41625 GT18, ATGT18 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g42907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26456 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018143 No alias not classified & original description: CDS=1-1647 0.02 OrthoFinder output from all 47 species
Zm00001e000360_P001 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 OrthoFinder output from all 47 species
Zm00001e004645_P001 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR004263 Exostosin 66 401
No external refs found!