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  5. AMTR_s00069p00157890

AMTR_s00069p00157890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.128

No description available


Gene families : OG0003208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00157890
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00156520 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aop_g15291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69403.t1 Aspi01Gene69403 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G057000.1 Ceric.19G057000 not classified & original description: pacid=50575271... 0.04 OrthoFinder output from all 47 species
Ceric.1Z233900.1 Ceric.1Z233900 not classified & original description: pacid=50628265... 0.04 OrthoFinder output from all 47 species
Ceric.1Z314900.1 Ceric.1Z314900 not classified & original description: pacid=50582127... 0.03 OrthoFinder output from all 47 species
Dcu_g24473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_157865g0010 AAc1, ACT1 Actin-1 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
MA_427792g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0174.g024516 No alias not classified & original description: CDS=1-474 0.04 OrthoFinder output from all 47 species
Solyc03g026370.1.1 Solyc03g026370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e000131_P001 Zm00001e000131 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!