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  5. AMTR_s00069p00163470

AMTR_s00069p00163470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.136

Description : Protein translocation.endoplasmic reticulum.GET post-translational insertion system.GET3 component


Gene families : OG0005417 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005417_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00163470
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre03.g204800 No alias Protein translocation.endoplasmic reticulum.GET... 0.01 OrthoFinder output from all 47 species
Smo173359 No alias Protein translocation.endoplasmic reticulum.GET... 0.02 OrthoFinder output from all 47 species
Zm00001e010192_P001 Zm00001e010192 component GET3 of GET post-translational insertion system 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
InterPro domains Description Start Stop
IPR025723 Anion-transp_ATPase-like_dom 15 307
No external refs found!