AMTR_s00070p00194870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00070.128

No description available


Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00070p00194870
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT2G28710 No alias C2H2-type zinc finger family protein 0.05 OrthoFinder output from all 47 species
AT3G10470 No alias C2H2-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT5G04390 No alias C2H2-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g050237 No alias C2H2-type subclass ZAT transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g052775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g119021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24559 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
GSVIVT01014844001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01016182001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01037363001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01037364001 No alias Zinc finger protein ZAT2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_10419 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os01g62130.1 LOC_Os01g62130 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g32220.1 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os04g46670.1 LOC_Os04g46670 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os05g02390.1 RHL41, ZAT12,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os05g38600.1 LOC_Os05g38600 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os11g47630.1 LOC_Os11g47630 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g17887 No alias C2H2-type subclass ZAT transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g25888 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Pnu_g08150 No alias C2H2-type subclass ZAT transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g37939 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Spa_g38932 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Zm00001e001253_P001 Zm00001e001253 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e002022_P001 Zm00001e002022 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e006181_P001 Zm00001e006181 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e011983_P001 CZF2, ZAT6,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e038054_P001 Zm00001e038054 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!