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  5. AMTR_s00071p00038040

AMTR_s00071p00038040 (PSD2,...)


Aliases : PSD2, evm_27.TU.AmTr_v1.0_scaffold00071.20

Description : Lipid metabolism.glycerolipid synthesis.phosphatidylethanolamine.phosphatidylserine decarboxylation pathway.extramitochondrial phosphatidylserine decarboxylase


Gene families : OG0004140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00038040

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01029733001 PSD2 Lipid metabolism.glycerolipid... 0.03 OrthoFinder output from all 47 species
MA_10589g0020 PSD2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0008654 phospholipid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003817 PS_Dcarbxylase 423 632
IPR000008 C2_dom 78 137
IPR002048 EF_hand_dom 226 247
No external refs found!