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  5. AMTR_s00071p00062800

AMTR_s00071p00062800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.35

Description : Chitinase 2 OS=Tulipa bakeri


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00062800

Target Alias Description ECC score Gene Family Method Actions
Adi_g049053 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g049054 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082491 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32400 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13931 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37029 No alias 2S globulin seed storage protein & original description: none 0.09 OrthoFinder output from all 47 species
Als_g44113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44545 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12205 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16620 No alias 2S globulin seed storage protein & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16625 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g38143 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05703.t1 Aspi01Gene05703 2S globulin seed storage protein & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene55010.t1 Aspi01Gene55010 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g59888 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z042600.1 Ceric.1Z042600 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z042900.1 Ceric.1Z042900 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z210700.1 Ceric.1Z210700 2S globulin seed storage protein & original description:... 0.11 OrthoFinder output from all 47 species
Ceric.1Z210800.1 Ceric.1Z210800 2S globulin seed storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g28835 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g29930 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33452 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Gb_05578 No alias no description available(sp|q7m443|chit2_tulsb : 320.0) 0.02 OrthoFinder output from all 47 species
LOC_Os01g57390.1 LOC_Os01g57390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g57400.1 LOC_Os01g57400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g06424 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Len_g43213 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g46226 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50580 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50581 No alias 2S globulin seed storage protein & original description: none 0.01 OrthoFinder output from all 47 species
Len_g50689 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g51292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36424 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06939 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30589 No alias 2S globulin seed storage protein & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g30590 No alias 2S globulin seed storage protein & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g32653 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g22062 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35593 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49402 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g072760.1.1 Solyc11g072760 no description available(sp|q7m443|chit2_tulsb : 364.0) 0.03 OrthoFinder output from all 47 species
Solyc11g072830.1.1 Solyc11g072830 no description available(sp|q7m443|chit2_tulsb : 343.0) 0.1 OrthoFinder output from all 47 species
Spa_g38568 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g41882 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53365 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g36586 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004770_P001 Zm00001e004770 no description available(sp|q7m443|chit2_tulsb : 315.0) 0.02 OrthoFinder output from all 47 species
Zm00001e015464_P001 Zm00001e015464 no description available(sp|q7m443|chit2_tulsb : 269.0) 0.02 OrthoFinder output from all 47 species
Zm00001e021310_P001 Zm00001e021310 no description available(sp|q7m443|chit2_tulsb : 281.0) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 20 107
No external refs found!