Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.100
Description : Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00266930 | OTP81 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00220510 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00169670 | CRR22,... | Pentatricopeptide repeat-containing protein At2g17210... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00155p00018120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33680 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G44880 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G47840 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G49710 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G33170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G39680 | EMB2744 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005534 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011562 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036768 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g057083 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075132 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g083164 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g086048 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104368 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g15073 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g16161 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27895 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28645 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene20498.t1 | CRR2, Aspi01Gene20498 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene28051.t3 | Aspi01Gene28051 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34731.t1 | Aspi01Gene34731 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34785.t1 | Aspi01Gene34785 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0270.g061187 | No alias | not classified & original description: CDS=1-3441 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0485.g073410 | No alias | not classified & original description: CDS=1-1641 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G069300.1 | OTP86, Ceric.09G069300 | not classified & original description: pacid=50588354... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30474 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35673 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g30253 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47804 | MEF21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g48025 | MEF21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25013 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g28912 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008715001 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01027504001 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035837001 | LPA66 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06272 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_14728 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_15639 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_18859 | CRR2 | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32439 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g19380.1 | LOC_Os01g19380 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g66160.1 | REME1, LOC_Os01g66160 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g58980.1 | LOC_Os04g58980 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g49185.1 | LOC_Os06g49185 | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g04352 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g25864 | OSB4 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_1109g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
| MA_139163g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_14381g0010 | EMB2758 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| MA_16339g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_79624g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8210920g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8491g0010 | CRR2 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g23160 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g23222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15698 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g17487 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12671 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29293 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29294 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43122 | OTP82 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g44325 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g37149 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03104 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30091 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30311 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g32978 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0012.g005639 | No alias | CDP-diacylglycerol phosphatidylserine synthase &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023182 | No alias | not classified & original description: CDS=1-4812 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g091610.1.1 | Solyc01g091610 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g011680.4.1 | Solyc02g011680 | Pentatricopeptide repeat-containing protein At5g27110... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g005460.1.1 | OTP82, Solyc04g005460 | Pentatricopeptide repeat-containing protein At2g20540... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g068810.4.1 | Solyc06g068810 | Pentatricopeptide repeat-containing protein At5g50990... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g006990.3.1 | Solyc07g006990 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g053520.2.1 | SLO1, Solyc07g053520 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g007040.1.1 | Solyc09g007040 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g010070.1.1 | EMB2758, Solyc09g010070 | Pentatricopeptide repeat-containing protein At4g33990... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g005970.1.1 | Solyc11g005970 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g007230.1.1 | Solyc11g007230 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g042400.1.1 | SLO1, Solyc12g042400 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16702 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g55549 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30039 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001007_P001 | Zm00001e001007 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005246_P001 | Zm00001e005246 | Pentatricopeptide repeat-containing protein At2g41080... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013166_P001 | Zm00001e013166 | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015358_P001 | Zm00001e015358 | Pentatricopeptide repeat-containing protein At5g39350... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020583_P001 | Zm00001e020583 | Pentatricopeptide repeat-containing protein At2g33680... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030887_P001 | Zm00001e030887 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037600_P001 | Zm00001e037600 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 328 | 357 |
| IPR002885 | Pentatricopeptide_repeat | 301 | 325 |
| IPR002885 | Pentatricopeptide_repeat | 90 | 115 |
| IPR002885 | Pentatricopeptide_repeat | 17 | 41 |
| IPR002885 | Pentatricopeptide_repeat | 402 | 423 |
| IPR002885 | Pentatricopeptide_repeat | 118 | 145 |
| IPR002885 | Pentatricopeptide_repeat | 215 | 272 |
| IPR002885 | Pentatricopeptide_repeat | 427 | 475 |
| No external refs found! |
