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  5. AMTR_s00071p00131570

AMTR_s00071p00131570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.114

Description : Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00071p00131570

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00131920 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00133840 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.06 OrthoFinder output from all 47 species
Adi_g048053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18713.t1 Aspi01Gene18713 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G003700.1 Ceric.20G003700 not classified & original description: pacid=50567318... 0.02 OrthoFinder output from all 47 species
Dac_g15807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016978001 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Gb_08596 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Gb_16261 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Gb_16281 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Gb_33797 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Gb_34217 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Lfl_g22776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10425962g0020 No alias Clavaminate synthase-like protein At3g21360... 0.06 OrthoFinder output from all 47 species
MA_10431045g0030 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
MA_20531g0020 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_796805g0010 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_867753g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_938243g0010 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Mp8g00790.1 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Msp_g07199 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo425605 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Smo439273 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Solyc03g121040.4.1 Solyc03g121040 Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 56 325
No external refs found!