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  5. AMTR_s00071p00133060

AMTR_s00071p00133060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.117

Description : Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00133060
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00131920 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00133840 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Adi_g048053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18017.t1 Aspi01Gene18017 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18018.t1 Aspi01Gene18018 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21751.t1 Aspi01Gene21751 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G003700.1 Ceric.20G003700 not classified & original description: pacid=50567318... 0.01 OrthoFinder output from all 47 species
Dac_g15807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28278 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g14052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_16261 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Gb_33797 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Gb_34217 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
LOC_Os08g29510.1 LOC_Os08g29510 Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Lfl_g31008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10425962g0020 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_10431045g0030 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_10431045g0040 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_220550g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_7041743g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_867753g0010 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_938243g0010 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Mp4g14250.1 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Msp_g07199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo439273 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Solyc03g121040.4.1 Solyc03g121040 Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Solyc05g009960.4.1 Solyc05g009960 Clavaminate synthase-like protein At3g21360... 0.01 OrthoFinder output from all 47 species
Spa_g16202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 32 104
No external refs found!