1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00071p00149400

AMTR_s00071p00149400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.134

Description : Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00149400

Target Alias Description ECC score Gene Family Method Actions
Adi_g007376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_16261 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Gb_16279 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Gb_33797 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Gb_34217 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Lfl_g38665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_498632g0010 No alias Clavaminate synthase-like protein At3g21360... 0.06 OrthoFinder output from all 47 species
MA_867753g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Msp_g07199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo90998 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Solyc03g121040.4.1 Solyc03g121040 Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Tin_g07190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 38 83
No external refs found!