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  5. AMTR_s00073p00033500

AMTR_s00073p00033500 (HSFB4, SCZ, AT-HSFB4,...)


Aliases : HSFB4, SCZ, AT-HSFB4, evm_27.TU.AmTr_v1.0_scaffold00073.4

Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00073p00033500
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270580 AT-HSFA6B,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
AMTR_s00095p00016160 HSFB4, SCZ,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.05 OrthoFinder output from all 47 species
AT1G67970 HSFA8, AT-HSFA8 heat shock transcription factor A8 0.03 OrthoFinder output from all 47 species
AT3G22830 AT-HSFA6B, HSFA6B heat shock transcription factor A6B 0.06 OrthoFinder output from all 47 species
Adi_g056671 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075153 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076259 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09418 ATHSFA1D, HSFA1D HSF-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Als_g07805 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14735 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08951 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0078.g038314 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0352.g066613 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: CDS=82-1875 0.05 OrthoFinder output from all 47 species
Cba_g06389 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G060800.1 HSFA1E,... HSF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.15G065200.1 HSFA1E,... HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G003800.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G078200.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.35G052000.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g11746 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04367 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009477001 HSFB4, SCZ, AT-HSFB4 RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
GSVIVT01020781001 HSFA4C, RHA1, AT-HSFA4C RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
GSVIVT01022134001 HSF4, HSFB1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
GSVIVT01037333001 HSFB4, SCZ, AT-HSFB4 RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
Gb_05885 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g25120.1 HSFB4, SCZ,... transcription factor (HSF) 0.01 OrthoFinder output from all 47 species
LOC_Os05g45410.1 HSF A4A,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
LOC_Os07g44690.1 HSFB4, SCZ,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g36700.1 HSFB4, SCZ,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28200.1 HSFB4, SCZ,... transcription factor (HSF) 0.08 OrthoFinder output from all 47 species
Len_g10124 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27595 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38313 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_8845456g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Mp4g12230.1 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Ore_g18363 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27452 AT-HSFA5, HSFA5 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62261 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20199 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05097 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28968 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53549 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57933 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60061 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012750 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: CDS=1-2229 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026285 ATHSF1, HSF1,... HSF-type transcription factor & original description: CDS=1-2472 0.03 OrthoFinder output from all 47 species
Sam_g14010 No alias HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo37324 ATHSF1, HSF1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
Solyc02g072060.3.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc04g016000.3.1 AT-HSFB3, HSFB3,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc06g053950.3.1 AT-HSFA6B,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g053960.3.1 AT-HSFA6B,... transcription factor (HSF) 0.05 OrthoFinder output from all 47 species
Solyc07g055710.3.1 HSFA4C, RHA1,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc08g076590.3.1 HSFA1B, ATHSF3,... transcription factor (HSF). transcriptional regulator (HsfA1) 0.03 OrthoFinder output from all 47 species
Solyc11g064990.2.1 HSFB4, SCZ,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Spa_g26714 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02653 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009909_P001 HSFB4, SCZ,... transcription factor (HSF) 0.06 OrthoFinder output from all 47 species
Zm00001e009944_P001 HSF4, HSFB1,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Zm00001e035680_P002 HSFB4, SCZ,... transcription factor (HSF) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 25 116
No external refs found!