Aliases : ATSUG1, RPT6A
Description : regulatory component *(RPT6) of 26S proteasome & original description: none
Gene families : OG0004338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004338_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00217520 | ATSUG1, RPT6A,... | Protein degradation.26S proteasome.regulatory... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G20000 | No alias | AAA-type ATPase family protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g055701 | ATSUG1, RPT6A | regulatory component *(RPT6) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000792.28 | ATSUG1, RPT6A | Protein degradation.26S proteasome.regulatory... | 0.03 | OrthoFinder output from all 47 species | |
| Cre04.g216600 | ATSUG1, RPT6A | Protein degradation.26S proteasome.regulatory... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g04554 | ATSUG1, RPT6A | regulatory component *(RPT6) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017222001 | ATSUG1, RPT6A | Protein degradation.26S proteasome.regulatory... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01035767001 | ATSUG1, RPT6A | Protein degradation.26S proteasome.regulatory... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g11050.1 | ATSUG1, RPT6A,... | regulatory component RPT6 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species | |
| Len_g15696 | ATSUG1, RPT6A | regulatory component *(RPT6) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g04290.1 | ATSUG1, RPT6A | regulatory component RPT6 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01586 | ATSUG1, RPT6A | regulatory component *(RPT6) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g018570.3.1 | ATSUG1, RPT6A,... | regulatory component RPT6 of 26S proteasome | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014515_P001 | ATSUG1, RPT6A,... | regulatory component RPT6 of 26S proteasome | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e024980_P001 | ATSUG1, RPT6A,... | regulatory component RPT6 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| MF | GO:0016887 | ATP hydrolysis activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000178 | exosome (RNase complex) | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004784 | superoxide dismutase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005730 | nucleolus | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1905354 | exoribonuclease complex | IEP | HCCA |
| No external refs found! |
