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  5. AMTR_s00077p00066810

AMTR_s00077p00066810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.45

Description : Non-specific lipid-transfer protein OS=Malus domestica


Gene families : OG0000407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00066810
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00024840 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00092p00021420 LTP5,... Non-specific lipid-transfer protein A OS=Ricinus communis 0.05 OrthoFinder output from all 47 species
AMTR_s00162p00083730 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT2G18370 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT2G38530 LP2, cdf3, LTP2 lipid transfer protein 2 0.02 OrthoFinder output from all 47 species
AT5G44265 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT5G59310 LTP4 lipid transfer protein 4 0.05 OrthoFinder output from all 47 species
AT5G59330 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Aev_g47330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08117.t1 LTP4, Aspi01Gene08117 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08118.t1 LTP4, Aspi01Gene08118 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G006400.1 Ceric.02G006400 not classified & original description: pacid=50584115... 0.02 OrthoFinder output from all 47 species
Ceric.11G012100.1 Ceric.11G012100 not classified & original description: pacid=50596478... 0.03 OrthoFinder output from all 47 species
Ceric.13G068200.1 Ceric.13G068200 not classified & original description: pacid=50636227... 0.04 OrthoFinder output from all 47 species
Ceric.30G041400.1 LTP1, ATLTP1,... not classified & original description: pacid=50608945... 0.02 OrthoFinder output from all 47 species
Ceric.30G047000.1 Ceric.30G047000 not classified & original description: pacid=50609459... 0.03 OrthoFinder output from all 47 species
Dac_g19696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15056 LTP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24012 LTP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01006001001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01021772001 No alias Non-specific lipid-transfer protein C,... 0.05 OrthoFinder output from all 47 species
GSVIVT01027088001 No alias Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia 0.04 OrthoFinder output from all 47 species
GSVIVT01030190001 No alias Non-specific lipid-transfer protein P5 OS=Vitis sp. 0.03 OrthoFinder output from all 47 species
Gb_23000 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_41630 No alias Non-specific lipid-transfer protein 4.1 OS=Hordeum... 0.03 OrthoFinder output from all 47 species
LOC_Os01g12020.1 LOC_Os01g12020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g59380.1 LOC_Os03g59380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g40010.1 LOC_Os05g40010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g06340.1 LOC_Os06g06340 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g34840.1 LOC_Os06g34840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g27940.1 LOC_Os07g27940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g02350.1 LOC_Os11g02350 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os11g02369.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2A OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os12g02300.1 LOC_Os12g02300 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os12g02330.2 LTP3, LOC_Os12g02330 Non-specific lipid-transfer protein 1 OS=Morus nigra... 0.04 OrthoFinder output from all 47 species
LOC_Os12g02340.1 LTP3, LOC_Os12g02340 Probable non-specific lipid-transfer protein 3... 0.03 OrthoFinder output from all 47 species
Len_g59234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10239006g0010 LTP4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_1056334g0010 LTP4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_107601g0010 LTP4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_128304g0010 No alias Non-specific lipid-transfer protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_18806g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_355839g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_422961g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_58978g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.04 OrthoFinder output from all 47 species
MA_6565643g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.06 OrthoFinder output from all 47 species
MA_6905336g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_903132g0010 No alias Non-specific lipid-transfer protein OS=Pinus taeda... 0.02 OrthoFinder output from all 47 species
Ore_g22339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06659 LTP6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019322 No alias not classified & original description: CDS=195-662 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019327 No alias not classified & original description: CDS=54-425 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023749 LTP1, ATLTP1, LP1 not classified & original description: CDS=116-469 0.03 OrthoFinder output from all 47 species
Sam_g33394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g081600.3.1 LTP4, Solyc01g081600 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.03 OrthoFinder output from all 47 species
Solyc01g090360.3.1 Solyc01g090360 Non-specific lipid-transfer protein 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc02g087910.3.1 Solyc02g087910 Non-specific lipid-transfer protein B OS=Ricinus... 0.03 OrthoFinder output from all 47 species
Solyc06g005780.1.1 Solyc06g005780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g067500.1.1 Solyc08g067500 no description available(sp|a0a2j6kl39|nltp_lacsa : 85.1) 0.03 OrthoFinder output from all 47 species
Solyc08g067510.1.1 LTP3, Solyc08g067510 no description available(sp|a0a2j6kl39|nltp_lacsa : 101.0) 0.06 OrthoFinder output from all 47 species
Solyc08g067550.1.1 Solyc08g067550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g008500.3.1 Solyc09g008500 Non-specific lipid-transfer protein 2 OS=Solanum... 0.08 OrthoFinder output from all 47 species
Solyc09g150148.1.1 Solyc09g150148 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc10g012110.3.1 Solyc10g012110 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g012120.1.1 Solyc10g012120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g012130.1.1 Solyc10g012130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g075118.1.1 Solyc10g075118 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Spa_g35078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g40525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026064_P001 Zm00001e026064 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037122_P001 Zm00001e037122 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 26 111
No external refs found!