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  5. AMTR_s00077p00067510

AMTR_s00077p00067510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.47

Description : Non-specific lipid-transfer protein OS=Malus domestica


Gene families : OG0000407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00067510
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00101310 evm_27.TU.AmTr_v1... Putative non-specific lipid-transfer protein 14... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00070120 LTP4,... Non-specific lipid-transfer protein OS=Helianthus annuus 0.05 OrthoFinder output from all 47 species
AMTR_s00162p00022020 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00162p00083730 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AT2G18370 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT2G38530 LP2, cdf3, LTP2 lipid transfer protein 2 0.03 OrthoFinder output from all 47 species
AT2G38540 LTP1, ATLTP1, LP1 lipid transfer protein 1 0.03 OrthoFinder output from all 47 species
AT3G08770 LTP6 lipid transfer protein 6 0.03 OrthoFinder output from all 47 species
AT4G33355 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT5G44265 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT5G59320 LTP3 lipid transfer protein 3 0.04 OrthoFinder output from all 47 species
Aspi01Gene08094.t1 LTP4, Aspi01Gene08094 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene08097.t1 LTP12, Aspi01Gene08097 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08117.t1 LTP4, Aspi01Gene08117 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08118.t1 LTP4, Aspi01Gene08118 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G006400.1 Ceric.02G006400 not classified & original description: pacid=50584115... 0.03 OrthoFinder output from all 47 species
Ceric.02G024100.1 Ceric.02G024100 not classified & original description: pacid=50585459... 0.03 OrthoFinder output from all 47 species
Ceric.02G024300.1 Ceric.02G024300 not classified & original description: pacid=50585057... 0.03 OrthoFinder output from all 47 species
Ceric.30G041400.1 LTP1, ATLTP1,... not classified & original description: pacid=50608945... 0.04 OrthoFinder output from all 47 species
Ceric.30G047000.1 Ceric.30G047000 not classified & original description: pacid=50609459... 0.05 OrthoFinder output from all 47 species
Dcu_g48712 LTP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15056 LTP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24012 LTP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24013 LP2, cdf3, LTP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29058 LTP1, ATLTP1, LP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010603001 No alias Putative non-specific lipid-transfer protein 14... 0.03 OrthoFinder output from all 47 species
GSVIVT01021772001 No alias Non-specific lipid-transfer protein C,... 0.03 OrthoFinder output from all 47 species
GSVIVT01027088001 No alias Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia 0.03 OrthoFinder output from all 47 species
Gb_00826 No alias Non-specific lipid-transfer protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_02341 LTP3 Non-specific lipid-transfer protein OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
Gb_17862 No alias Non-specific lipid-transfer protein 3 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Gb_20255 No alias Non-specific lipid-transfer protein OS=Gerbera hybrida... 0.03 OrthoFinder output from all 47 species
Gb_23000 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Gb_25561 LTP3 Non-specific lipid-transfer protein 4 (Fragment) OS=Lens... 0.03 OrthoFinder output from all 47 species
LOC_Os03g59380.1 LOC_Os03g59380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g40010.1 LOC_Os05g40010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06340.1 LOC_Os06g06340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g02350.1 LOC_Os11g02350 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os11g02369.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2A OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os12g02310.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2B OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os12g02340.1 LTP3, LOC_Os12g02340 Probable non-specific lipid-transfer protein 3... 0.08 OrthoFinder output from all 47 species
Lfl_g38891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100155g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_164786g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_209545g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.02 OrthoFinder output from all 47 species
MA_307546g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_422961g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6565643g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.03 OrthoFinder output from all 47 species
MA_6905336g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7418293g0010 LTP6 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_903132g0010 No alias Non-specific lipid-transfer protein OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
Msp_g43910 LTP1, ATLTP1, LP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023749 LTP1, ATLTP1, LP1 not classified & original description: CDS=116-469 0.03 OrthoFinder output from all 47 species
Sam_g17432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g005770.1.1 Solyc06g005770 Non-specific lipid-transfer protein 1 OS=Morus nigra... 0.03 OrthoFinder output from all 47 species
Solyc08g067510.1.1 LTP3, Solyc08g067510 no description available(sp|a0a2j6kl39|nltp_lacsa : 101.0) 0.04 OrthoFinder output from all 47 species
Solyc08g067540.1.1 Solyc08g067540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g067550.1.1 Solyc08g067550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g008500.3.1 Solyc09g008500 Non-specific lipid-transfer protein 2 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc09g150148.1.1 Solyc09g150148 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g012110.3.1 Solyc10g012110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g012120.1.1 Solyc10g012120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g075060.2.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc10g075090.3.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc10g075103.1.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc10g075118.1.1 Solyc10g075118 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc10g075150.2.1 Solyc10g075150 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc10g076200.3.1 Solyc10g076200 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Tin_g44689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037122_P001 Zm00001e037122 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040319_P005 Zm00001e040319 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 26 108
No external refs found!