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  5. AMTR_s00077p00142370

AMTR_s00077p00142370 (UBC10,...)


Aliases : UBC10, evm_27.TU.AmTr_v1.0_scaffold00077.140

Description : Protein degradation.peptide tagging.Membrane-anchored-Ubiquitin (MUB)-anchor addition.UBC-subclass-6 conjugation E2 protein


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00142370

Target Alias Description ECC score Gene Family Method Actions
Adi_g009967 UBC28 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015507 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074639 UBC28 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08866 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08867 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13362 UBC37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0155.g053654 UBC9 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Dde_g48511 EMB144, CIN4, COP10, FUS9 component *(COP10) of CDDD substrate adaptor module of... 0.01 OrthoFinder output from all 47 species
Ehy_g29627 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Gb_19293 UBC10 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Len_g27675 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
MA_194g0030 ATUBC11, UBC11 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Pir_g65750 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02572 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012469 ATUBC11, UBC11 not classified & original description: CDS=5553-5795 0.02 OrthoFinder output from all 47 species
Solyc02g083570.3.1 UBC10, Solyc02g083570 conjugation E2 protein 0.04 OrthoFinder output from all 47 species
Solyc08g008220.3.1 UBC10, Solyc08g008220 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Solyc08g081945.1.1 UBC10, Solyc08g081945 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Tin_g03039 ATUBC11, UBC11 E2 MUB ubiquiTin-conjugaTing enzyme & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!